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Leucine-rich repeat receptor-like gene screen reveals that Nicotiana RXEG1 regulates glycoside hydrolase 12 MAMP detection.

Identifieur interne : 000729 ( Main/Exploration ); précédent : 000728; suivant : 000730

Leucine-rich repeat receptor-like gene screen reveals that Nicotiana RXEG1 regulates glycoside hydrolase 12 MAMP detection.

Auteurs : Yan Wang [République populaire de Chine] ; Yuanpeng Xu [République populaire de Chine] ; Yujing Sun [République populaire de Chine] ; Huibin Wang [République populaire de Chine] ; Jiaming Qi [République populaire de Chine] ; Bowen Wan [République populaire de Chine] ; Wenwu Ye [République populaire de Chine] ; Yachun Lin [République populaire de Chine] ; Yuanyuan Shao [République populaire de Chine] ; Suomeng Dong [République populaire de Chine] ; Brett M. Tyler [États-Unis] ; Yuanchao Wang [République populaire de Chine]

Source :

RBID : pubmed:29426870

Descripteurs français

English descriptors

Abstract

Activation of innate immunity by membrane-localized receptors is conserved across eukaryotes. Plant genomes contain hundreds of such receptor-like genes and those encoding proteins with an extracellular leucine-rich repeat (LRR) domain represent the largest family. Here, we develop a high-throughput approach to study LRR receptor-like genes on a genome-wide scale. In total, 257 tobacco rattle virus-based constructs are generated to target 386 of the 403 identified LRR receptor-like genes in Nicotiana benthamiana for silencing. Using this toolkit, we identify the LRR receptor-like protein Response to XEG1 (RXEG1) that specifically recognizes the glycoside hydrolase 12 protein XEG1. RXEG1 associates with XEG1 via the LRR domain in the apoplast and forms a complex with the LRR receptor-like kinases BAK1 and SOBIR1 to transduce the XEG1-induced defense signal. Thus, this genome-wide silencing assay is demonstrated to be an efficient toolkit to pinpoint new immune receptors, which will contribute to developing durable disease resistance.

DOI: 10.1038/s41467-018-03010-8
PubMed: 29426870
PubMed Central: PMC5807360


Affiliations:


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Le document en format XML

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<title xml:lang="en">Leucine-rich repeat receptor-like gene screen reveals that Nicotiana RXEG1 regulates glycoside hydrolase 12 MAMP detection.</title>
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<name sortKey="Wang, Yan" sort="Wang, Yan" uniqKey="Wang Y" first="Yan" last="Wang">Yan Wang</name>
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<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing</wicri:regionArea>
<wicri:noRegion>Nanjing</wicri:noRegion>
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<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), 210095, Nanjing</wicri:regionArea>
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<name sortKey="Xu, Yuanpeng" sort="Xu, Yuanpeng" uniqKey="Xu Y" first="Yuanpeng" last="Xu">Yuanpeng Xu</name>
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<nlm:affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</nlm:affiliation>
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<nlm:affiliation>Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), 210095, Nanjing, China.</nlm:affiliation>
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<wicri:regionArea>Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), 210095, Nanjing</wicri:regionArea>
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<name sortKey="Sun, Yujing" sort="Sun, Yujing" uniqKey="Sun Y" first="Yujing" last="Sun">Yujing Sun</name>
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<nlm:affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</nlm:affiliation>
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<name sortKey="Wang, Huibin" sort="Wang, Huibin" uniqKey="Wang H" first="Huibin" last="Wang">Huibin Wang</name>
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<name sortKey="Qi, Jiaming" sort="Qi, Jiaming" uniqKey="Qi J" first="Jiaming" last="Qi">Jiaming Qi</name>
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<name sortKey="Wan, Bowen" sort="Wan, Bowen" uniqKey="Wan B" first="Bowen" last="Wan">Bowen Wan</name>
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<name sortKey="Ye, Wenwu" sort="Ye, Wenwu" uniqKey="Ye W" first="Wenwu" last="Ye">Wenwu Ye</name>
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<name sortKey="Lin, Yachun" sort="Lin, Yachun" uniqKey="Lin Y" first="Yachun" last="Lin">Yachun Lin</name>
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<nlm:affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing</wicri:regionArea>
<wicri:noRegion>Nanjing</wicri:noRegion>
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<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), 210095, Nanjing</wicri:regionArea>
<wicri:noRegion>Nanjing</wicri:noRegion>
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<name sortKey="Shao, Yuanyuan" sort="Shao, Yuanyuan" uniqKey="Shao Y" first="Yuanyuan" last="Shao">Yuanyuan Shao</name>
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<nlm:affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing</wicri:regionArea>
<wicri:noRegion>Nanjing</wicri:noRegion>
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<nlm:affiliation>Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), 210095, Nanjing, China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), 210095, Nanjing</wicri:regionArea>
<wicri:noRegion>Nanjing</wicri:noRegion>
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<name sortKey="Dong, Suomeng" sort="Dong, Suomeng" uniqKey="Dong S" first="Suomeng" last="Dong">Suomeng Dong</name>
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<nlm:affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</nlm:affiliation>
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<nlm:affiliation>Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), 210095, Nanjing, China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
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<author>
<name sortKey="Tyler, Brett M" sort="Tyler, Brett M" uniqKey="Tyler B" first="Brett M" last="Tyler">Brett M. Tyler</name>
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<nlm:affiliation>Center for Genome Research and Biocomputing and Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, 97331, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Center for Genome Research and Biocomputing and Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, 97331</wicri:regionArea>
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</author>
<author>
<name sortKey="Wang, Yuanchao" sort="Wang, Yuanchao" uniqKey="Wang Y" first="Yuanchao" last="Wang">Yuanchao Wang</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China. wangyc@njau.edu.cn.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing</wicri:regionArea>
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<affiliation wicri:level="1">
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<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), 210095, Nanjing</wicri:regionArea>
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<series>
<title level="j">Nature communications</title>
<idno type="eISSN">2041-1723</idno>
<imprint>
<date when="2018" type="published">2018</date>
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<keywords scheme="KwdEn" xml:lang="en">
<term>Amino Acid Sequence (MeSH)</term>
<term>Disease Resistance (genetics)</term>
<term>Gene Expression Regulation, Plant (MeSH)</term>
<term>Glycoside Hydrolases (genetics)</term>
<term>Glycoside Hydrolases (metabolism)</term>
<term>Phylogeny (MeSH)</term>
<term>Phytophthora (physiology)</term>
<term>Plant Diseases (genetics)</term>
<term>Plant Diseases (microbiology)</term>
<term>Plant Leaves (genetics)</term>
<term>Plant Leaves (metabolism)</term>
<term>Plant Leaves (microbiology)</term>
<term>Plant Proteins (classification)</term>
<term>Plant Proteins (genetics)</term>
<term>Plants, Genetically Modified (MeSH)</term>
<term>Protein-Serine-Threonine Kinases (classification)</term>
<term>Protein-Serine-Threonine Kinases (genetics)</term>
<term>Protein-Serine-Threonine Kinases (metabolism)</term>
<term>Proteins (classification)</term>
<term>Proteins (genetics)</term>
<term>Proteins (metabolism)</term>
<term>Reactive Oxygen Species (metabolism)</term>
<term>Sequence Homology, Amino Acid (MeSH)</term>
<term>Tobacco (genetics)</term>
<term>Tobacco (metabolism)</term>
<term>Tobacco (microbiology)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Espèces réactives de l'oxygène (métabolisme)</term>
<term>Feuilles de plante (génétique)</term>
<term>Feuilles de plante (microbiologie)</term>
<term>Feuilles de plante (métabolisme)</term>
<term>Glycosidases (génétique)</term>
<term>Glycosidases (métabolisme)</term>
<term>Maladies des plantes (génétique)</term>
<term>Maladies des plantes (microbiologie)</term>
<term>Phylogenèse (MeSH)</term>
<term>Phytophthora (physiologie)</term>
<term>Protein-Serine-Threonine Kinases (classification)</term>
<term>Protein-Serine-Threonine Kinases (génétique)</term>
<term>Protein-Serine-Threonine Kinases (métabolisme)</term>
<term>Protéines (classification)</term>
<term>Protéines (génétique)</term>
<term>Protéines (métabolisme)</term>
<term>Protéines végétales (classification)</term>
<term>Protéines végétales (génétique)</term>
<term>Régulation de l'expression des gènes végétaux (MeSH)</term>
<term>Résistance à la maladie (génétique)</term>
<term>Similitude de séquences d'acides aminés (MeSH)</term>
<term>Séquence d'acides aminés (MeSH)</term>
<term>Tabac (génétique)</term>
<term>Tabac (microbiologie)</term>
<term>Tabac (métabolisme)</term>
<term>Végétaux génétiquement modifiés (MeSH)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="classification" xml:lang="en">
<term>Plant Proteins</term>
<term>Protein-Serine-Threonine Kinases</term>
<term>Proteins</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en">
<term>Glycoside Hydrolases</term>
<term>Plant Proteins</term>
<term>Protein-Serine-Threonine Kinases</term>
<term>Proteins</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="fr">
<term>Protein-Serine-Threonine Kinases</term>
<term>Protéines</term>
<term>Protéines végétales</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en">
<term>Disease Resistance</term>
<term>Plant Diseases</term>
<term>Plant Leaves</term>
<term>Tobacco</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr">
<term>Feuilles de plante</term>
<term>Glycosidases</term>
<term>Maladies des plantes</term>
<term>Protein-Serine-Threonine Kinases</term>
<term>Protéines</term>
<term>Protéines végétales</term>
<term>Résistance à la maladie</term>
<term>Tabac</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en">
<term>Glycoside Hydrolases</term>
<term>Plant Leaves</term>
<term>Protein-Serine-Threonine Kinases</term>
<term>Proteins</term>
<term>Reactive Oxygen Species</term>
<term>Tobacco</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr">
<term>Feuilles de plante</term>
<term>Maladies des plantes</term>
<term>Tabac</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en">
<term>Plant Diseases</term>
<term>Plant Leaves</term>
<term>Tobacco</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr">
<term>Espèces réactives de l'oxygène</term>
<term>Feuilles de plante</term>
<term>Glycosidases</term>
<term>Protein-Serine-Threonine Kinases</term>
<term>Protéines</term>
<term>Tabac</term>
</keywords>
<keywords scheme="MESH" qualifier="physiologie" xml:lang="fr">
<term>Phytophthora</term>
</keywords>
<keywords scheme="MESH" qualifier="physiology" xml:lang="en">
<term>Phytophthora</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Amino Acid Sequence</term>
<term>Gene Expression Regulation, Plant</term>
<term>Phylogeny</term>
<term>Plants, Genetically Modified</term>
<term>Sequence Homology, Amino Acid</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Phylogenèse</term>
<term>Régulation de l'expression des gènes végétaux</term>
<term>Similitude de séquences d'acides aminés</term>
<term>Séquence d'acides aminés</term>
<term>Végétaux génétiquement modifiés</term>
</keywords>
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<front>
<div type="abstract" xml:lang="en">Activation of innate immunity by membrane-localized receptors is conserved across eukaryotes. Plant genomes contain hundreds of such receptor-like genes and those encoding proteins with an extracellular leucine-rich repeat (LRR) domain represent the largest family. Here, we develop a high-throughput approach to study LRR receptor-like genes on a genome-wide scale. In total, 257 tobacco rattle virus-based constructs are generated to target 386 of the 403 identified LRR receptor-like genes in Nicotiana benthamiana for silencing. Using this toolkit, we identify the LRR receptor-like protein Response to XEG1 (RXEG1) that specifically recognizes the glycoside hydrolase 12 protein XEG1. RXEG1 associates with XEG1 via the LRR domain in the apoplast and forms a complex with the LRR receptor-like kinases BAK1 and SOBIR1 to transduce the XEG1-induced defense signal. Thus, this genome-wide silencing assay is demonstrated to be an efficient toolkit to pinpoint new immune receptors, which will contribute to developing durable disease resistance.</div>
</front>
</TEI>
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<MedlineCitation Status="MEDLINE" Owner="NLM">
<PMID Version="1">29426870</PMID>
<DateCompleted>
<Year>2018</Year>
<Month>03</Month>
<Day>19</Day>
</DateCompleted>
<DateRevised>
<Year>2019</Year>
<Month>02</Month>
<Day>09</Day>
</DateRevised>
<Article PubModel="Electronic">
<Journal>
<ISSN IssnType="Electronic">2041-1723</ISSN>
<JournalIssue CitedMedium="Internet">
<Volume>9</Volume>
<Issue>1</Issue>
<PubDate>
<Year>2018</Year>
<Month>02</Month>
<Day>09</Day>
</PubDate>
</JournalIssue>
<Title>Nature communications</Title>
<ISOAbbreviation>Nat Commun</ISOAbbreviation>
</Journal>
<ArticleTitle>Leucine-rich repeat receptor-like gene screen reveals that Nicotiana RXEG1 regulates glycoside hydrolase 12 MAMP detection.</ArticleTitle>
<Pagination>
<MedlinePgn>594</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1038/s41467-018-03010-8</ELocationID>
<Abstract>
<AbstractText>Activation of innate immunity by membrane-localized receptors is conserved across eukaryotes. Plant genomes contain hundreds of such receptor-like genes and those encoding proteins with an extracellular leucine-rich repeat (LRR) domain represent the largest family. Here, we develop a high-throughput approach to study LRR receptor-like genes on a genome-wide scale. In total, 257 tobacco rattle virus-based constructs are generated to target 386 of the 403 identified LRR receptor-like genes in Nicotiana benthamiana for silencing. Using this toolkit, we identify the LRR receptor-like protein Response to XEG1 (RXEG1) that specifically recognizes the glycoside hydrolase 12 protein XEG1. RXEG1 associates with XEG1 via the LRR domain in the apoplast and forms a complex with the LRR receptor-like kinases BAK1 and SOBIR1 to transduce the XEG1-induced defense signal. Thus, this genome-wide silencing assay is demonstrated to be an efficient toolkit to pinpoint new immune receptors, which will contribute to developing durable disease resistance.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Wang</LastName>
<ForeName>Yan</ForeName>
<Initials>Y</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0001-7465-5518</Identifier>
<AffiliationInfo>
<Affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), 210095, Nanjing, China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Xu</LastName>
<ForeName>Yuanpeng</ForeName>
<Initials>Y</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0001-9606-9448</Identifier>
<AffiliationInfo>
<Affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), 210095, Nanjing, China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Sun</LastName>
<ForeName>Yujing</ForeName>
<Initials>Y</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0002-8077-8060</Identifier>
<AffiliationInfo>
<Affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), 210095, Nanjing, China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Wang</LastName>
<ForeName>Huibin</ForeName>
<Initials>H</Initials>
<AffiliationInfo>
<Affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
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<LastName>Qi</LastName>
<ForeName>Jiaming</ForeName>
<Initials>J</Initials>
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</AffiliationInfo>
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<LastName>Wan</LastName>
<ForeName>Bowen</ForeName>
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<AffiliationInfo>
<Affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</Affiliation>
</AffiliationInfo>
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</Author>
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<LastName>Ye</LastName>
<ForeName>Wenwu</ForeName>
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<AffiliationInfo>
<Affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
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<LastName>Lin</LastName>
<ForeName>Yachun</ForeName>
<Initials>Y</Initials>
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<Affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), 210095, Nanjing, China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Shao</LastName>
<ForeName>Yuanyuan</ForeName>
<Initials>Y</Initials>
<AffiliationInfo>
<Affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
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</Author>
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<LastName>Dong</LastName>
<ForeName>Suomeng</ForeName>
<Initials>S</Initials>
<AffiliationInfo>
<Affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
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</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Tyler</LastName>
<ForeName>Brett M</ForeName>
<Initials>BM</Initials>
<AffiliationInfo>
<Affiliation>Center for Genome Research and Biocomputing and Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, 97331, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Wang</LastName>
<ForeName>Yuanchao</ForeName>
<Initials>Y</Initials>
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<AffiliationInfo>
<Affiliation>Department of Plant Pathology, Nanjing Agricultural University, 210095, Nanjing, China. wangyc@njau.edu.cn.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), 210095, Nanjing, China. wangyc@njau.edu.cn.</Affiliation>
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<Month>02</Month>
<Day>09</Day>
</ArticleDate>
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<Country>England</Country>
<MedlineTA>Nat Commun</MedlineTA>
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<ISSNLinking>2041-1723</ISSNLinking>
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<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance>
</Chemical>
<Chemical>
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<NameOfSubstance UI="D011506">Proteins</NameOfSubstance>
</Chemical>
<Chemical>
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<Chemical>
<RegistryNumber>EC 3.2.1.-</RegistryNumber>
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<RefSource>Front Genet. 2019 Mar 07;10:162</RefSource>
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<DescriptorName UI="D000595" MajorTopicYN="N">Amino Acid Sequence</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D060467" MajorTopicYN="N">Disease Resistance</DescriptorName>
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<MeshHeading>
<DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName>
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<MeshHeading>
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</MeshHeading>
<MeshHeading>
<DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName>
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</MeshHeading>
<MeshHeading>
<DescriptorName UI="D030821" MajorTopicYN="N">Plants, Genetically Modified</DescriptorName>
</MeshHeading>
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<DescriptorName UI="D011506" MajorTopicYN="N">Proteins</DescriptorName>
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<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
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</MeshHeading>
<MeshHeading>
<DescriptorName UI="D017386" MajorTopicYN="N">Sequence Homology, Amino Acid</DescriptorName>
</MeshHeading>
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